1DXW

structure of hetero complex of non structural protein (NS) of hepatitis C virus (HCV) and synthetic peptidic compound


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: Least Restraint Violation

Literature

Macromolecules
Sequence Display for 1DXW

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 20209.44

Macromolecule Entities
Molecule Chains Length Organism Details
SERINE PROTEASE A 186 Hepatitis c virus Fragment: SEQUENCE DATABASE RESIDUES 1027-1206
Details: COVALENT BOND BETWEEN SER 139 OG AND ABK 190 C1 (DI-FLUORO-ABU-KETOACID) OF INHIBITOR
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
2ZF
Query on 2ZF

N-(tert-butoxycarbonyl)-L-alpha-glutamyl- N-[(1R)-1-(carboxycarbonyl)-3,3-difluoropropyl]- L-leucinamide
C21 H33 F2 N3 O9
WXVMZATZAOHPFR-AVGNSLFASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000426
Query on PRD_000426
A BOC-GLU-LEU-FKI, PEPTIDE INHIBITOR Peptide-like /
Inhibitor
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: LEAST RESTRAINT VIOLATION

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-17
  • Released Date: 2001-01-12
  • Deposition author(s): Barbato, G., Cicero, D.O., Cordier, F., Narjes, F., Gerlach, B., Sambucini, S., Grzesiek, S., Matassa, V.G., Defrancesco, R., Bazzo, R.

Revision History

  • 2011-07-13
    Type: Atomic model, Database references, Derived calculations, Non-polymer description, Structure summary, Version format compliance
  • 2012-11-30
    Type: Other