1DXE

2-DEHYDRO-3-DEOXY-GALACTARATE ALDOLASE FROM ESCHERICHIA COLI

Structural Biology Knowledgebase: 1DXE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.171

Literature

Macromolecules
Sequence Display for 1DXE

Classification: CLASS II ALDOLASE

Total Structure Weight: 55251.06

Macromolecule Entities
Molecule Chains Length Organism Details
2-DEHYDRO-3-DEOXY-GALACTARATE ALDOLASE A, B 256 Escherichia coli EC#: 4.1.2.20 IUBMB
Gene Name(s): garL yhaF b3126 JW3095
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.194
  • R-Value Work: 0.171
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 129.07 α = 90.00
b = 129.07 β = 90.00
c = 167.96 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-03
  • Released Date: 2000-08-25
  • Deposition author(s): Izard, T., Blackwell, N.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4