1DVI

CALPAIN DOMAIN VI WITH CALCIUM BOUND


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1DVI

Classification: CALCIUM-DEPENDENT PROTEASE

Total Structure Weight: 42898.76

Macromolecule Entities
Molecule Chains Length Organism Details
CALPAIN A, B 184 Rattus norvegicus Fragment: SMALL (REGULATORY) SUBUNIT, DOMAIN VI, RESIDUES 87 - 270
Mutation: C146S
Gene Name(s): Capns1 Capn4 Css1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.294
  • R-Value Work: 0.206
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 75.00 α = 90.00
b = 87.40 β = 90.00
c = 118.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-05-15
  • Released Date: 1998-05-27
  • Deposition author(s): Cygler, M., Blanchard, H., Grochulski, P.

Revision History

  • 2012-05-02
    Type: Polymer description | Details: remove EC number
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4