1DR9

CRYSTAL STRUCTURE OF A SOLUBLE FORM OF B7-1 (CD80)

Structural Biology Knowledgebase: 1DR9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.238

Literature

Macromolecules
Sequence Display for 1DR9

Classification: IMMUNE SYSTEM

Total Structure Weight: 23656.92

Macromolecule Entities
Molecule Chains Length Organism Details
T LYMPHOCYTE ACTIVATION ANTIGEN A 201 Homo sapiens Fragment: EXTRACELLULAR REGION
Mutation: T200A
Gene Name(s): CD80 Gene View CD28LG CD28LG1 LAB7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.238
  • Space Group: I 41 2 2

Unit Cell:

Length (Å) Angle (°)
a = 57.28 α = 90.00
b = 57.28 β = 90.00
c = 298.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-06
  • Released Date: 2000-01-10
  • Deposition author(s): Ikemizu, S., Jones, E.Y., Stuart, D.I., Davis, S.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update