1DQR

CRYSTAL STRUCTURE OF RABBIT PHOSPHOGLUCOSE ISOMERASE, A GLYCOLYTIC ENZYME THAT MOONLIGHTS AS NEUROLEUKIN, AUTOCRINE MOTILITY FACTOR, AND DIFFERENTIATION MEDIATOR

Structural Biology Knowledgebase: 1DQR SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 1DQR

Classification: ISOMERASE

Total Structure Weight: 125946.44

Macromolecule Entities
Molecule Chains Length Organism Details
PHOSPHOGLUCOSE ISOMERASE A, B 557 Oryctolagus cuniculus EC#: 5.3.1.9 IUBMB
Mutation: L109P, E222K, V283I
Gene Name(s): GPI Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
6PG
Query on 6PG

A, B 6-PHOSPHOGLUCONIC ACID
C6 H13 O10 P
BIRSGZKFKXLSJQ-SQOUGZDYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
6PG N/A in BindingDB
Ki: 43000 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.212
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 82.69 α = 90.00
b = 115.27 β = 90.00
c = 271.84 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-05
  • Released Date: 2000-02-09
  • Deposition author(s): Bahnson, B.J., Jeffery, C.J., Ringe, D., Petsko, G.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4