1DQP

CRYSTAL STRUCTURE OF GIARDIA GUANINE PHOSPHORIBOSYLTRANSFERASE COMPLEXED WITH IMMUCILLING

Structural Biology Knowledgebase: 1DQP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 1DQP

Classification: TRANSFERASE

Total Structure Weight: 53417.69

Macromolecule Entities
Molecule Chains Length Organism Details
GUANINE PHOSPHORIBOSYLTRANSFERASE A, B 230 Giardia intestinalis EC#: 2.4.2.8 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IMG
Query on IMG

A, B 1,4-DIDEOXY-1,4-IMINO-1-(S)-(9-DEAZAGUANIN- 9-YL)-D-RIBITOL
IMMUCILLIN-G (Synonym)
C11 H15 N5 O4
KBIDJCVAURJXFG-PVEDRDFWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
IPA
Query on IPA

A, B ISOPROPYL ALCOHOL
2-PROPANOL (Synonym)
C3 H8 O
KFZMGEQAYNKOFK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.204
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 56.86 α = 90.00
b = 71.61 β = 90.00
c = 122.37 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-04
  • Released Date: 2000-07-26
  • Deposition author(s): Shi, W., Munagala, N.R., Wang, C.C., Li, C.M., Tyler, P.C., Furneaux, R.H., Grubmeyer, C., Schramm, V.L., Almo, S.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4