1DPP

DIPEPTIDE BINDING PROTEIN COMPLEX WITH GLYCYL-L-LEUCINE

Structural Biology Knowledgebase: 1DPP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.223

Literature

Macromolecules
Sequence Display for 1DPP

Classification: PEPTIDE BINDING PROTEIN

Total Structure Weight: 230730.86

Macromolecule Entities
Molecule Chains Length Organism Details
DIPEPTIDE BINDING PROTEIN A, C, E, G 507 Escherichia coli Gene Name(s): dppA b3544 JW3513
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
LEU
Query on LEU

A, C, E, G LEUCINE
C6 H13 N O2
ROHFNLRQFUQHCH-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GLY
Query on GLY

A, C, E, G GLYCINE
C2 H5 N O2
DHMQDGOQFOQNFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.2 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.223
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 182.57 α = 90.00
b = 182.57 β = 90.00
c = 211.88 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-08-11
  • Released Date: 1995-12-07
  • Deposition author(s): Dunten, P., Mowbray, S.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4