1DPI

STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP

Structural Biology Knowledgebase: 1DPI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Observed: 0.200

Literature

Macromolecules
Sequence Display for 1DPI

Classification: NUCLEOTIDYLTRANSFERASE

Total Structure Weight: 68227.80

Macromolecule Entities
Molecule Chains Length Organism Details
DNA POLYMERASE I KLENOW FRAGMENT A 605 Escherichia coli EC#: 2.7.7.7 IUBMB
Gene Name(s): polA resA b3863 JW3835
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Observed: 0.200
  • Space Group: P 43

Unit Cell:

Length (Å) Angle (°)
a = 102.90 α = 90.00
b = 102.90 β = 90.00
c = 85.80 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1987-08-11
  • Released Date: 1987-10-16
  • Deposition author(s): Beese, L., Ollis, D., Steitz, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4