1DL8

CRYSTAL STRUCTURE OF 5-F-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE-4-CARBOXAMIDE BOUND TO D(CGTACG)2

Structural Biology Knowledgebase: 1DL8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.214

Literature

Macromolecules
Sequence Display for 1DL8

Classification: DNA

Total Structure Weight: 2461.98

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*TP*AP*CP*G)-3') A 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DA7
Query on DA7

A 5-FLUORO-9-AMINO-(N-(2-DIMETHYLAMINO)ETHYL)ACRIDINE- 4-CARBOXAMIDE
C18 H19 F N4 O
QEHXKZSBSOBCGM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.214
  • Space Group: P 64
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 30.14 α = 90.00
b = 30.14 β = 90.00
c = 39.40 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-12-08
  • Released Date: 2000-10-30
  • Deposition author(s): Adams, A., Guss, J.M., Collyer, C.A., Denny, W.A., Wakelin, L.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4