1DKW

CRYSTAL STRUCTURE OF TRIOSE-PHOSPHATE ISOMERASE WITH MODIFIED SUBSTRATE BINDING SITE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1DKW

Classification: ISOMERASE

Total Structure Weight: 51723.07

Macromolecule Entities
Molecule Chains Length Organism Details
TRIOSEPHOSPHATE ISOMERASE A, B 238 Trypanosoma brucei EC#: 5.3.1.1 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TBU
Query on TBU

A, B TERTIARY-BUTYL ALCOHOL
2-METHYL-2-PROPANOL (Synonym)
C4 H10 O
DKGAVHZHDRPRBM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.65 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.183
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 46.57 α = 90.00
b = 88.53 β = 97.26
c = 56.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-08
  • Released Date: 2000-11-03
  • Deposition author(s): Norledge, B.V., Lambeir, A.M., Abagyan, R.A., Rottman, A., Fernandez, A.M., Filimonov, V.V., Peter, M.G., Wierenga, R.K.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance