1DG1

WHOLE, UNMODIFIED, EF-TU(ELONGATION FACTOR TU).

Structural Biology Knowledgebase: 1DG1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.168

Literature

Macromolecules
Sequence Display for 1DG1

Classification: RNA BINDING PROTEIN

Total Structure Weight: 87676.88

Macromolecule Entities
Molecule Chains Length Organism Details
ELONGATION FACTOR TU G, H 394 Escherichia coli Gene Name(s): tufB b3980 JW3943
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

G, H GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

G, H MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.168
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 63.60 α = 90.00
b = 104.60 β = 97.02
c = 67.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-11-22
  • Released Date: 1999-12-01
  • Deposition author(s): Abel, K., Yoder, M., Hilgenfeld, R., Jurnak, F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4