1DFF

PEPTIDE DEFORMYLASE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.88 Å
  • R-Value Free: 0.289
  • R-Value Work: 0.184

Literature

Macromolecules
Sequence Display for 1DFF

Classification: HYDROLASE

Total Structure Weight: 18863.13

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDE DEFORMYLASE A 164 Escherichia coli EC#: 3.5.1.88 IUBMB
Gene Name(s): def fms b3287 JW3248
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.88 Å
  • R-Value Free: 0.289
  • R-Value Work: 0.184
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 55.35 α = 90.00
b = 55.35 β = 90.00
c = 230.92 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-08-19
  • Released Date: 1998-09-02
  • Deposition author(s): Chan, M.K., Gong, W., Rajagopalan, P.T.R., Hao, B., Tsai, C.M., Pei, D.

Revision History

  • 2008-03-03
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance