1DEE

CRYSTAL STRUCTURE AT 2.7A RESOLUTION OF A COMPLEX BETWEEN A STAPHYLOCOCCUS AUREUS DOMAIN AND A FAB FRAGMENT OF A HUMAN IGM ANTIBODY

Structural Biology Knowledgebase: 1DEE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 1DEE

Classification: IMMUNE SYSTEM

Total Structure Weight: 154741.11

Macromolecule Entities
Molecule Chains Length Organism Details
IGM RF 2A2 A, C, E 214 Homo sapiens Fragment: FAB LIGHT CHAIN
IGM RF 2A2 B, D, F 223 Homo sapiens Fragment: FAB HEAVY CHAIN
IMMUNOGLOBULIN G BINDING PROTEIN A G, H 54 Staphylococcus aureus Fragment: RECOMBINANT DOMAIN D
Gene Name(s): spa SAOUHSC_00069
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.217
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 68.52 α = 90.00
b = 78.91 β = 100.71
c = 163.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-11-15
  • Released Date: 2000-05-24
  • Deposition author(s): Graille, M., Stura, E.A., Corper, A.L., Sutton, B.J., Taussig, M.J., Charbonnier, J.B., Silverman, G.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4