1D7F

CRYSTAL STRUCTURE OF ASPARAGINE 233-REPLACED CYCLODEXTRIN GLUCANOTRANSFERASE FROM ALKALOPHILIC BACILLUS SP. 1011 DETERMINED AT 1.9 A RESOLUTION

Structural Biology Knowledgebase: 1D7F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.156

Literature

Macromolecules
Sequence Display for 1D7F

Classification: TRANSFERASE

Total Structure Weight: 150573.80

Macromolecule Entities
Molecule Chains Length Organism Details
CYCLODEXTRIN GLUCANOTRANSFERASE A, B 686 Bacillus sp. 1011 EC#: 2.4.1.19 IUBMB
Mutation: H233N, R452P, A454G
Gene Name(s): cgt
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.203
  • R-Value Work: 0.156
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 64.86 α = 85.10
b = 74.46 β = 105.00
c = 79.10 γ = 100.90

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-10-18
  • Released Date: 2000-03-17
  • Deposition author(s): Ishii, N., Haga, K., Yamane, K., Harata, K.

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4