1D67

THE MOLECULAR STRUCTURE OF AN IDARUBICIN-D(TGATCA) COMPLEX AT HIGH RESOLUTION

Structural Biology Knowledgebase: 1D67 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.222

Literature

Macromolecules
Sequence Display for 1D67

Classification: DNA

Total Structure Weight: 2305.75

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*TP*GP*AP*TP*CP*A)-3') A 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DM5
Query on DM5

A IDARUBICIN
4-DEMETHOXY-DAUNORUBICIN (Synonym)
C26 H27 N O9
XDXDZDZNSLXDNA-TZNDIEGXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.222
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 28.19 α = 90.00
b = 28.19 β = 90.00
c = 52.77 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1992-03-31
  • Released Date: 1993-07-15
  • Deposition author(s): Gallois, B., Langlois D'Estaintot, B., Brown, T., Hunter, W.N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4