1D3E

CRYO-EM STRUCTURE OF HUMAN RHINOVIRUS 16 (HRV16) COMPLEXED WITH A TWO-DOMAIN FRAGMENT OF ITS CELLULAR RECEPTOR, INTERCELLULAR ADHESION MOLECULE-1 (D1D2-ICAM-1). IMPLICATIONS FOR VIRUS-RECEPTOR INTERACTIONS. ALPHA CARBONS ONLY

Structural Biology Knowledgebase: 1D3E SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 28.0 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Literature

Macromolecules
Sequence Display for 1D3E

Classification: Virus / Receptor [ VIPERdb ]

Total Structure Weight: 114351.98

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (INTERCELLULAR ADHESION MOLECULE-1) I 185 Homo sapiens Fragment: FIRST TWO DOMAINS, RESIDUES 1-185
Gene Name(s): ICAM1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP1) 1 285 Human rhinovirus sp. Mutation: N1A
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP2) 2 252 Human rhinovirus sp. Gene Name(s):
PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP3) 3 238 Human rhinovirus sp. Gene Name(s):
PROTEIN (RHINOVIRUS 16 COAT PROTEIN VP4) 4 68 Human rhinovirus sp. Gene Name(s):


Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 28.0 Å
  • Aggregation State: Particle
  • Specimen Type: Vitreous Ice (cryo Em)
  • Reconstruction Method: Single Particle

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-09-29
  • Released Date: 2000-01-19
  • Deposition author(s): Bella, J., Rossmann, M.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4