1D3A

CRYSTAL STRUCTURE OF THE WILD TYPE HALOPHILIC MALATE DEHYDROGENASE IN THE APO FORM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.202

Literature

Macromolecules
Sequence Display for 1D3A

Classification: OXIDOREDUCTASE

Total Structure Weight: 65506.96

Macromolecule Entities
Molecule Chains Length Organism Details
HALOPHILIC MALATE DEHYDROGENASE A, B 303 Haloarcula marismortui EC#: 1.1.1.37 IUBMB
Gene Name(s): mdh rrnAC2706
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.94 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.202
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 115.78 α = 90.00
b = 131.33 β = 90.00
c = 125.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-09-28
  • Released Date: 2000-03-20
  • Deposition author(s): Richard, S.B., Madern, D., Garcin, E., Zaccai, G.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance
  • 2014-04-09
    Type: Database references