1D2Y

N-TERMINAL DOMAIN CORE METHIONINE MUTATION

Structural Biology Knowledgebase: 1D2Y SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Observed: 0.163

Literature

Macromolecules
Sequence Display for 1D2Y

Classification: HYDROLASE

Total Structure Weight: 18871.70

Macromolecule Entities
Molecule Chains Length Organism Details
LYSOZYME A 164 Enterobacteria phage t4 sensu lato EC#: 3.2.1.17 IUBMB
Mutation: I50M, C54T, C97A
Gene Name(s): E
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HED
Query on HED

A 2-HYDROXYETHYL DISULFIDE
C4 H10 O2 S2
KYNFOMQIXZUKRK-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.06 Å
  • R-Value Observed: 0.163
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 61.09 α = 90.00
b = 61.09 β = 90.00
c = 97.43 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-09-28
  • Released Date: 1999-10-08
  • Deposition author(s): Gassner, N.C., Matthews, B.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4