1D01

STRUCTURE OF TNF RECEPTOR ASSOCIATED FACTOR 2 IN COMPLEX WITH A HUMAN CD30 PEPTIDE

Structural Biology Knowledgebase: 1D01 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 1D01

Classification: APOPTOSIS

Total Structure Weight: 116955.51

Macromolecule Entities
Molecule Chains Length Organism Details
TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 2 A, B, C..., D, E, FA, B, C, D, E, F 168 Homo sapiens EC#: 6.3.2 IUBMB
Fragment: TRAF DOMAIN
Mutation: L365R
Gene Name(s): TRAF2 Gene View TRAP3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CD30 PEPTIDE G, H, I 9 Homo sapiens EC#: 2.3.1.41 IUBMB
Fragment: TRAF-BINDING SEQUENCE
Gene Name(s): TNFRSF8 Gene View CD30 D1S166E
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
G, H, I NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.220
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 91.30 α = 90.00
b = 110.40 β = 120.00
c = 91.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-09-07
  • Released Date: 2003-12-02
  • Deposition author(s): Ye, H., Park, Y.C., Kreishman, M., Kieff, E., Wu, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4