1C41

CRYSTAL STRUCTURES OF A PENTAMERIC FUNGAL AND AN ICOSAHEDRAL PLANT LUMAZINE SYNTHASE REVEALS THE STRUCTURAL BASIS FOR DIFFERENCES IN ASSEMBLY

Structural Biology Knowledgebase: 1C41 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.248

Literature

Macromolecules
Sequence Display for 1C41

Classification: TRANSFERASE

Total Structure Weight: 215763.81

Macromolecule Entities
Molecule Chains Length Organism Details
LUMAZINE SYNTHASE A, B, C..., D, E, F, G, H, I, JA, B, C, D, E, F, G, H, I, J 200 Magnaporthe grisea EC#: 2.5.1.78 IUBMB
Gene Name(s): MGG_04626
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
LMZ
Query on LMZ

A, B, C, D, E, F, G, H, I, J 5-NITROSO-6-RIBITYL-AMINO-2,4(1H,3H)-PYRIMIDINEDIONE
C9 H14 N4 O7
YMWIHKCBRFEJMH-RPDRRWSUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D, E, F, G, H, I, J SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.248
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 98.80 α = 90.00
b = 124.70 β = 90.00
c = 141.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-08-03
  • Released Date: 2000-08-06
  • Deposition author(s): Persson, K., Schneider, G., Jordan, D.B., Viitanen, P.V., Sandalova, T.

Revision History

  • 2013-01-16
    Type: Polymer description | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4