1C3S

CRYSTAL STRUCTURE OF AN HDAC HOMOLOG COMPLEXED WITH SAHA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1C3S

Classification: LYASE

Total Structure Weight: 43031.38

Macromolecule Entities
Molecule Chains Length Organism Details
HDLP (HISTONE DEACETYLASE-LIKE PROTEIN) A 375 Aquifex aeolicus Mutation: L35K, C75S, C77S, D146N
Gene Name(s): acuC1 aq_1023
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SHH
Query on SHH

A OCTANEDIOIC ACID HYDROXYAMIDE PHENYLAMIDE
SAHA (Synonym)
C14 H20 N2 O3
WAEXFXRVDQXREF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.200
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 51.49 α = 90.00
b = 94.15 β = 97.02
c = 78.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-07-28
  • Released Date: 1999-09-15
  • Deposition author(s): Finnin, M.S., Donigian, J.R., Pavletich, N.P.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance