1C1L

LACTOSE-LIGANDED CONGERIN I

Structural Biology Knowledgebase: 1C1L SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 1C1L

Classification: SUGAR BINDING PROTEIN

Total Structure Weight: 15698.51

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (CONGERIN I) A 137 Conger myriaster Fragment: CARBOHYDRATE-RECOGNITION-DOMAIN
Details: COMPLEXED WITH LACTOSE
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GAL
Query on GAL

A BETA-D-GALACTOSE
C6 H12 O6
WQZGKKKJIJFFOK-FPRJBGLDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BGC
Query on BGC

A BETA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-VFUOTHLCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.213
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 95.44 α = 90.00
b = 36.45 β = 90.00
c = 40.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-03-03
  • Released Date: 1999-10-08
  • Deposition author(s): Shirai, T., Mitsuyama, C., Niwa, Y., Matsui, Y., Hotta, H., Yamane, T., Kamiya, H., Ishii, C., Ogawa, T., Muramoto, K.

Revision History

  • 2016-04-20
    Type: Sequence database correspondence | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values