1C0Y

SOLUTION STRUCTURE OF THE [AF]-C8-DG ADDUCT POSITIONED OPPOSITE DA AT A TEMPLATE-PRIMER JUNCTION

Structural Biology Knowledgebase: 1C0Y SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: All Conformers Presented

Literature

Macromolecules
Sequence Display for 1C0Y

Classification: DNA

Total Structure Weight: 7186.90

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*AP*CP*GP*CP*TP*AP*CP*CP*AP*TP*CP*C)-3') A 13 synthetic N ATOM OF AF-GROUP LINKED TO C8 ATOM OF G 4
DNA (5'-D(*GP*GP*AP*TP*GP*GP*TP*AP*GP*C)-3') B 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AF
Query on AF

A 2-AMINOFLUORENE
C13 H11 N
CFRFHWQYWJMEJN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: ALL CONFORMERS PRESENTED

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-07-19
  • Released Date: 1999-08-31
  • Deposition author(s): Gu, Z., Gorin, A., Hingerty, B.E., Broyde, S., Patel, D.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4