1C0I

CRYSTAL STRUCTURE OF D-AMINO ACID OXIDASE IN COMPLEX WITH TWO ANTHRANYLATE MOLECULES


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.199

Literature

Macromolecules
Sequence Display for 1C0I

Classification: OXIDOREDUCTASE

Total Structure Weight: 40674.74

Macromolecule Entities
Molecule Chains Length Organism Details
D-AMINO ACID OXIDASE A 363 Rhodotorula toruloides EC#: 1.4.3.3 IUBMB
Gene Name(s): DAO1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BE2
Query on BE2

A 2-AMINOBENZOIC ACID
C7 H7 N O2
RWZYAGGXGHYGMB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BE2 N/A in BindingDB
Kd: 2000000 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.249
  • R-Value Work: 0.199
  • Space Group: I 4 2 2

Unit Cell:

Length (Å) Angle (°)
a = 120.83 α = 90.00
b = 120.83 β = 90.00
c = 136.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-07-16
  • Released Date: 2002-02-27
  • Deposition author(s): Pollegioni, L., Diederichs, K., Molla, G., Umhau, S., Welte, W., Ghisla, S., Pilone, M.S.

Revision History

  • Version 1_0: 2002-02-27

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2017-10-04

    Type: Refinement description