1BYM

SOLUTION STRUCTURES OF THE C-TERMINAL DOMAIN OF DIPHTHERIA TOXIN REPRESSOR

Structural Biology Knowledgebase: 1BYM SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: No Noe Distance Violation Greater Than 0.35 a No Dihedral Angle Restraint Violation Greater Than 5 Deg Rms Difference For Bond Deviations From Ideality Less Than 0.01 a Rms Difference For Angle Deviations From Ideality Less Than 2 Deg Lowest Total Energy

Literature

Macromolecules
Sequence Display for 1BYM

Classification: GENE REGULATION

Total Structure Weight: 10609.90

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (DIPHTHERIA TOXIN REPRESSOR) A 97 Corynebacterium diphtheriae Fragment: RESIDUES 130-226
Gene Name(s): dtxR DIP1414
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG


Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100
  • Conformers Submitted: 20
  • Selection Criteria: NO NOE DISTANCE VIOLATION GREATER THAN 0.35 A, NO DIHEDRAL ANGLE RESTRAINT VIOLATION GREATER THAN 5 DEG, RMS DIFFERENCE FOR BOND DEVIATIONS FROM IDEALITY LESS THAN 0.01 A, RMS DIFFERENCE FOR ANGLE DEVIATIONS FROM IDEALITY LESS THAN 2 DEG, LOWEST TOTAL ENERGY

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-10-17
  • Released Date: 1998-10-21
  • Deposition author(s): Wang, G., Wylie, G.P., Twigg, P.D., Caspar, D.L.D., Murphy, J.R., Logan, T.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4