1BN5

HUMAN METHIONINE AMINOPEPTIDASE 2

Structural Biology Knowledgebase: 1BN5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1BN5

Classification: AMINOPEPTIDASE

Total Structure Weight: 53252.25

Macromolecule Entities
Molecule Chains Length Organism Details
METHIONINE AMINOPEPTIDASE A 478 Homo sapiens EC#: 3.4.11.18 IUBMB
Mutation: V347I
Details: COMPLEX WITH T-BUTANOL AND COBALT
Gene Name(s): METAP2 Gene View MNPEP P67EIF2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TBU
Query on TBU

A TERTIARY-BUTYL ALCOHOL
2-METHYL-2-PROPANOL (Synonym)
C4 H10 O
DKGAVHZHDRPRBM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO
Query on CO

A COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.228
  • R-Value Work: 0.183
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 90.49 α = 90.00
b = 99.38 β = 90.00
c = 101.59 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-31
  • Released Date: 1999-07-31
  • Deposition author(s): Liu, S., Widom, J., Kemp, C.W., Crews, C.M., Clardy, J.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4