1BM2

GRB2-SH2 DOMAIN IN COMPLEX WITH CYCLO-[N-ALPHA-ACETYL-L-THI ALYSYL-O-PHOSPHOTYROSYL-VALYL-ASPARAGYL-VALYL-PROLYL] (PKF273-791)

Structural Biology Knowledgebase: 1BM2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 1BM2

Classification: HORMONE / GROWTH FACTOR

Total Structure Weight: 14420.39

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (GROWTH FACTOR RECEPTOR BOUND PROTEIN 2) A 117 Homo sapiens Fragment: SH2 DOMAIN
Mutation: F47G, I48S
Gene Name(s): GRB2 Gene View ASH
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
PROTEIN (PKF273-791) L 7 synthetic Details: ACE: N-TERMINAL ACETYL GROUP PTR: L-PHOSPHOTYROSINE

Small Molecules
Modified Residues 3 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
L NON-POLYMER C2 H4 O --
SLZ
Query on SLZ
L L-PEPTIDE LINKING C5 H12 N2 O2 S LYS
PTR
Query on PTR
L L-PEPTIDE LINKING C9 H12 N O6 P TYR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.197
  • Space Group: P 3 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 83.78 α = 90.00
b = 83.78 β = 90.00
c = 31.99 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-27
  • Released Date: 1998-08-05
  • Deposition author(s): Rondeau, J.M., Zurini, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4