1BGQ

RADICICOL BOUND TO THE ATP BINDING SITE OF THE N-TERMINAL DOMAIN OF THE YEAST HSP90 CHAPERONE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1BGQ

Classification: CHAPERONE

Total Structure Weight: 25891.81

Macromolecule Entities
Molecule Chains Length Organism Details
HEAT SHOCK PROTEIN 90 A 225 Saccharomyces cerevisiae Fragment: N-TERMINAL DOMAIN
Gene Name(s): HSP82 HSP90 YPL240C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
RDC
Query on RDC

A RADICICOL
MONORDEN (Synonym)
C18 H17 Cl O6
WYZWZEOGROVVHK-GTMNPGAYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
RDC IC50: 30 - <200 nM (100) BindingDB

Kd: 2.7 nM  BindingMOAD
Kd: 2.7 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.200
  • Space Group: P 43 2 2

Unit Cell:

Length (Å) Angle (°)
a = 73.94 α = 90.00
b = 73.94 β = 90.00
c = 110.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-05-29
  • Released Date: 1999-06-08
  • Deposition author(s): Roe, S.M., Prodromou, C., Pearl, L.H.

Revision History

  • Version 1_0: 1999-06-08

    Type: Initial release

  • Version 1_1: 2008-03-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance