1BFV

MONOCLONAL ANTIBODY FRAGMENT FV4155 FROM E. COLI

Structural Biology Knowledgebase: 1BFV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.187

Literature

Macromolecules
Sequence Display for 1BFV

Classification: IMMUNOGLOBULIN

Total Structure Weight: 26290.61

Macromolecule Entities
Molecule Chains Length Organism Details
FV4155 L 113 Mus musculus Fragment: MONOCLONAL ANTIBODY FV FRAGMENT
Mutation: V2I, V3E, M4L, T7S, L9P, A19V, H31S, S32N, G34R, N35R, T36N, N39H, A45P, L52V, E84A, I90L, T96S, T97S, P101L, G105S
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
FV4155 H 119 Mus musculus Fragment: MONOCLONAL ANTIBODY FV FRAGMENT
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
STG
Query on STG

H ESTRIOL 3-(B-D-GLUCURONIDE)
C24 H32 O9
UZKIAJMSMKLBQE-JRSYHJKYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

H, L ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
STG N/A in BindingDB
Ka: 1e+07 M-1  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.187
  • Space Group: P 4 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.90 α = 90.00
b = 89.90 β = 90.00
c = 59.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-05-27
  • Released Date: 1997-12-03
  • Deposition author(s): Trinh, C.H., Phillips, S.E.V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4