1B49

DCMP HYDROXYMETHYLASE FROM T4 (PHOSPHATE-BOUND)

Structural Biology Knowledgebase: 1B49 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.159

Literature

Macromolecules
Sequence Display for 1B49

Classification: TRANSFERASE

Total Structure Weight: 57236.82

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (DEOXYCYTIDYLATE HYDROXYMETHYLASE) A, C 246 Enterobacteria phage t4 sensu lato EC#: 2.1.2.8 IUBMB
Gene Name(s): 42
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, C PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.202
  • R-Value Work: 0.159
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 176.34 α = 90.00
b = 53.27 β = 115.21
c = 75.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-01-06
  • Released Date: 1999-01-13
  • Deposition author(s): Song, H.K., Sohn, S.H., Suh, S.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values