1AVT

SUBTILISIN CARLSBERG D-PARA-CHLOROPHENYL-1-ACETAMIDO BORONIC ACID INHIBITOR COMPLEX

Structural Biology Knowledgebase: 1AVT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.157

Literature

Macromolecules
Sequence Display for 1AVT

Classification: SERINE PROTEASE

Total Structure Weight: 27592.83

Macromolecule Entities
Molecule Chains Length Organism Details
SUBTILISIN CARLSBERG, TYPE VIII A 274 Bacillus licheniformis EC#: 3.4.21.62 IUBMB
Fragment: FULL PROTEIN
Mutation: T103S, P129A, S158N, N161S, S212N, S221X
Gene Name(s): apr
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CLD
Query on CLD
A D-PEPTIDE LINKING C13 H19 B Cl N2 O6 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.157
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 53.00 α = 90.00
b = 55.40 β = 90.00
c = 76.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-09-19
  • Released Date: 1998-03-25
  • Deposition author(s): Stoll, V.S., Eger, B.T., Hynes, R.C., Martichonok, V., Jones, J.B., Pai, E.F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4