1AVB

ARCELIN-1 FROM PHASEOLUS VULGARIS L

Structural Biology Knowledgebase: 1AVB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1AVB

Classification: LECTIN

Total Structure Weight: 51895.26

Macromolecule Entities
Molecule Chains Length Organism Details
ARCELIN-1 A, B 226 Phaseolus vulgaris Gene Name(s): ARC1 ARC Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.208
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.65 α = 90.00
b = 92.57 β = 90.00
c = 67.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-09-15
  • Released Date: 1998-10-14
  • Deposition author(s): Mourey, L., Pedelacq, J.D., Fabre, C., Rouge, P., Samama, J.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update