1AP5

TYR34->PHE MUTANT OF HUMAN MITOCHONDRIAL MANGANESE SUPEROXIDE DISMUTASE

Structural Biology Knowledgebase: 1AP5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.320
  • R-Value Work: 0.195

Literature

Macromolecules
Sequence Display for 1AP5

Classification: OXIDOREDUCTASE

Total Structure Weight: 44544.49

Macromolecule Entities
Molecule Chains Length Organism Details
MANGANESE SUPEROXIDE DISMUTASE A, B 198 Homo sapiens EC#: 1.15.1.1 IUBMB
Mutation: Y34F
Gene Name(s): SOD2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A, B MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.320
  • R-Value Work: 0.195
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 75.18 α = 90.00
b = 79.77 β = 90.00
c = 68.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-07-24
  • Released Date: 1998-01-28
  • Deposition author(s): Guan, Y., Borgstahl, G.E.O., Tainer, J.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values