1AMK

LEISHMANIA MEXICANA TRIOSE PHOSPHATE ISOMERASE

Structural Biology Knowledgebase: 1AMK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Observed: 0.107

Literature

Macromolecules
Sequence Display for 1AMK

Classification: GLUCONEOGENESIS

Total Structure Weight: 27365.46

Macromolecule Entities
Molecule Chains Length Organism Details
TRIOSE PHOSPHATE ISOMERASE A 251 Leishmania mexicana EC#: 5.3.1.1 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PGA
Query on PGA

A 2-PHOSPHOGLYCOLIC ACID
C2 H5 O6 P
ASCFNMCAHFUBCO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
PGA N/A in BindingDB
Ki: 50000 nM  BindingMOAD
Ki: 50000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Observed: 0.107
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 99.09 α = 90.00
b = 52.94 β = 118.13
c = 58.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-06-17
  • Released Date: 1997-12-17
  • Deposition author(s): Williams, J.C., Wierenga, R.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4