1AM4

COMPLEX BETWEEN CDC42HS.GMPPNP AND P50 RHOGAP (H. SAPIENS)

Structural Biology Knowledgebase: 1AM4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 1AM4

Classification: COMPLEX (GTPASE-ACTIVATING / GTP-BINDING)

Total Structure Weight: 128785.18

Macromolecule Entities
Molecule Chains Length Organism Details
P50-RHOGAP A, B, C 199 Homo sapiens Gene Name(s): ARHGAP1 Gene View CDC42GAP RHOGAP1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CDC42HS D, E, F 177 Homo sapiens Details: HETERODIMER
Gene Name(s): CDC42 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GNP
Query on GNP

D, E, F PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

D, E, F MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.230
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 78.11 α = 90.01
b = 78.12 β = 90.00
c = 78.10 γ = 90.05

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-06-22
  • Released Date: 1998-07-15
  • Deposition author(s): Rittinger, K., Walker, P., Gamblin, S.J., Smerdon, S.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4