1ALZ

GRAMICIDIN D FROM BACILLUS BREVIS (ETHANOL SOLVATE)

Structural Biology Knowledgebase: 1ALZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.86 Å
  • R-Value Observed: 0.162

Literature

Macromolecules
Sequence Display for 1ALZ

Classification: ANTIBIOTIC

Total Structure Weight: 4400.59

Macromolecule Entities
Molecule Chains Length Organism Details
ILE-GRAMICIDIN C A 16 Brevibacillus brevis Mutation: X1X, W11Y
VAL-GRAMICIDIN A B 16 Brevibacillus brevis

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EOH
Query on EOH

A, B ETHANOL
C2 H6 O
LFQSCWFLJHTTHZ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 2 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000150
Query on PRD_000150
B GRAMICIDIN A Polypeptide /
Antibiotic
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)
PRD_000153
Query on PRD_000153
A GRAMICIDIN C Polypeptide /
Antibiotic
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.86 Å
  • R-Value Observed: 0.162
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 31.59 α = 90.00
b = 32.37 β = 90.00
c = 24.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-06-06
  • Released Date: 1998-03-04
  • Deposition author(s): Burkhart, B.M., Pangborn, W.A., Duax, W.L., Langs, D.A.
  • Previous versions: 1GMA

Revision History

  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-27
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-27
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-27
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-27
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-27
    Type: Atom occupancy | Details: Restore author's atom occupancy
  • 2011-07-27
    Type: Linkage | Details: Linkage
  • 2011-07-27
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-27
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4