1ALX

GRAMICIDIN D FROM BACILLUS BREVIS (METHANOL SOLVATE)

Structural Biology Knowledgebase: 1ALX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Observed: 0.100

Literature

Macromolecules
Sequence Display for 1ALX

Classification: ANTIBIOTIC

Total Structure Weight: 4382.44

Macromolecule Entities
Molecule Chains Length Organism Details
GRAMICIDIN A A 16 Brevibacillus brevis Mutation: W11Y
GRAMICIDIN A B 16 Brevibacillus brevis

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MOH
Query on MOH

A, B METHANOL
C H4 O
OKKJLVBELUTLKV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000152
Query on PRD_000152
A, B GRAMICIDIN D Polypeptide /
Antibiotic
Ligand Explorer Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol) Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.2 Å
  • R-Value Observed: 0.100
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 14.91 α = 90.00
b = 26.01 β = 92.03
c = 31.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-06-05
  • Released Date: 1998-03-04
  • Deposition author(s): Burkhart, B.M., Langs, D.A., Smith, G.D., Courseille, C., Precigoux, G., Hospital, M., Pangborn, W.A., Duax, W.L.

Revision History

  • 2013-02-06
    Type: Biological assembly | Details: corrected biological assembly
  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-27
    Type: Atom occupancy | Details: Restore author's atom occupancy
  • 2011-07-27
    Type: Linkage | Details: Linkage
  • 2011-07-27
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-27
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-27
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-27
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-27
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-27
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4