1AKQ

D95A OXIDIZED FLAVODOXIN MUTANT FROM D. VULGARIS

Structural Biology Knowledgebase: 1AKQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1AKQ

Classification: ELECTRON TRANSPORT

Total Structure Weight: 16116.61

Macromolecule Entities
Molecule Chains Length Organism Details
FLAVODOXIN A 147 Desulfovibrio vulgaris Mutation: D95A
Gene Name(s): DVU_2680
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
FMN N/A in BindingDB
Kd: 0.79 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.240
  • R-Value Work: 0.190
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 52.81 α = 90.00
b = 52.81 β = 90.00
c = 139.95 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-03-27
  • Released Date: 1998-12-02
  • Deposition author(s): Mccarthy, A., Walsh, M., Higgins, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4