1AGU

THE SOLUTION NMR STRUCTURE OF THE C10R ADDUCT OF BENZO[A]PYRENE-DIOL-EPOXIDE AT THE N6 POSITION OF ADENINE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE SEQUENCE CODING FOR AMINO ACIDS 60-62 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, MINIMIZED AVERAGE STRUCTURE

Structural Biology Knowledgebase: 1AGU SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 1
  • Conformers Submitted: 1
  • Selection Criteria: This Structure Provided the Best Fit For the Noe Data Based On the Relaxation Matrix Analysis Using Corma.

Literature

Macromolecules
Sequence Display for 1AGU

Classification: DNA

Total Structure Weight: 7009.79

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*GP*AP*CP*EP*AP*GP*AP*AP*G)-3') A 11 synthetic C10R-BPDE-N6-ADENINE ADDUCT
DNA (5'-D(*CP*TP*TP*CP*TP*TP*GP*TP*CP*CP*G)-3') B 11 synthetic C10R-BPDE-N6-ADENINE ADDUCT

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
E
Query on E
A DNA LINKING C30 H28 N5 O9 P DA

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 1
  • Conformers Submitted: 1
  • Selection Criteria: THIS STRUCTURE PROVIDED THE BEST-FIT FOR THE NOE DATA BASED ON THE RELAXATION MATRIX ANALYSIS USING CORMA.

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1997-03-25
  • Released Date: 1997-08-20
  • Deposition author(s): Zegar, I.S., Stone, M.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4