1A8B

RAT ANNEXIN V COMPLEXED WITH GLYCEROPHOSPHOETHANOLAMINE

Structural Biology Knowledgebase: 1A8B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.200

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1A8B

Classification: CALCIUM BINDING PROTEIN

Total Structure Weight: 36299.56

Macromolecule Entities
Molecule Chains Length Organism Details
ANNEXIN V A 319 Rattus norvegicus Gene Name(s): Anxa5 Anx5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GPE
Query on GPE

A L-ALPHA-GLYCEROPHOSPHORYLETHANOLAMINE
C5 H14 N O6 P
JZNWSCPGTDBMEW-RXMQYKEDSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed: 0.200
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 157.47 α = 90.00
b = 157.47 β = 90.00
c = 37.44 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-03-23
  • Released Date: 1998-06-17
  • Deposition author(s): Swairjo, M.A., Concha, N.O., Kaetzel, M.A., Dedman, J.R., Seaton, B.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4