1A5H

CATALYTIC DOMAIN OF HUMAN TWO-CHAIN TISSUE PLASMINOGEN ACTIVATOR COMPLEX OF A BIS-BENZAMIDINE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.178

Literature

Macromolecules
Sequence Display for 1A5H

Classification: HYDROLASE

Total Structure Weight: 58751.05

Macromolecule Entities
Molecule Chains Length Organism Details
TISSUE PLASMINOGEN ACTIVATOR C, D 7 Homo sapiens EC#: 3.4.21.68 IUBMB
Fragment: HEAVY CHAIN FRAGMENT, CATALYTIC DOMAIN
Gene Name(s): PLAT Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
TISSUE PLASMINOGEN ACTIVATOR A, B 252 Homo sapiens EC#: 3.4.21.68 IUBMB
Fragment: LIGHT CHAIN, CATALYTIC DOMAIN
Gene Name(s): PLAT Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BBA
Query on BBA

A, B 2,7-BIS-(4-AMIDINOBENZYLIDENE)-CYCLOHEPTAN- 1-ONE
BIS-BENZAMIDINE (Synonym)
C23 H28 N4 O
BXYGSMRTHHSAHZ-PMACEKPBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BBA N/A in BindingDB
N/A in BindingMoad
Ki: 500 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.178
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 151.83 α = 90.00
b = 60.50 β = 110.50
c = 62.61 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-02-17
  • Released Date: 1999-04-20
  • Deposition author(s): Renatus, M., Bode, W., Stubbs, M.T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4