1A1F

DSNR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GACC SITE)

Structural Biology Knowledgebase: 1A1F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.225

Currently 1A1F does not have a wwPDB validation report.


Literature

Macromolecules
Sequence Display for 1A1F

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 17674.01


Macromolecule Entities
Molecule Chains Length Organism Details
THREE-FINGER ZIF268 PEPTIDE A 90 Mus musculus Mutation: R118D, D120S, E121N
Gene Name(s): Egr1 Egr-1 Krox-24
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*AP*CP*C)-3') B 11 synthetic
DNA (5'-D(*TP*GP*GP*TP*CP*CP*CP*AP*CP*GP*C)-3') C 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.270
  • R-Value Work: 0.225
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 43.00 α = 90.00
b = 55.90 β = 90.00
c = 128.40 γ = 90.00

Structure Validation

Currently 1A1F does not have a validation report.



Entry History

Deposition Data

  • Deposited Date: 1997-12-10
  • Released Date: 1998-06-10
  • Deposition author(s): Elrod-Erickson, M., Benson, T.E., Pabo, C.O.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4