4M94

d(ATCCGTTATAACGGAT) complexed with Moloney Murine Leukemia virus reverse transcriptase catalytic fragment

Structural Biology Knowledgebase: 4M94 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 4M94

Classification: TRANSFERASE / DNA

Total Structure Weight: 34450.55


Macromolecule Entities
Molecule Chains Length Organism Details
Gag-Pol polyprotein A 259 Murine leukemia virus EC#: 2.7.7.49 IUBMB 2.7.7.7 IUBMB 3.1.26.4 IUBMB 3.4.23 IUBMB
Fragment: UNP residues 683-937
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
5' d(ATCCGttA) 3' B 8 synthetic
5' d(TAACGGAT) 3' G 8 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
QBT
Query on QBT
B DNA LINKING C10 H17 N2 O8 P T

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.14 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.201
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 53.96 α = 90.00
b = 145.72 β = 90.00
c = 46.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-08-14
  • Released Date: 2014-03-12
  • Deposition author(s): Singh, I.

Revision History

  • 2014-04-02
    Type: Citation | Details: Citation update