4HFN

X-ray Crystal Structure of a Ternary Complex of Double Bond Reductase from Nicotiana tabacum

Structural Biology Knowledgebase: 4HFN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.172

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HFN

Classification: OXIDOREDUCTASE

Total Structure Weight: 80070.02

Macromolecule Entities
Molecule Chains Length Organism Details
Allyl alcohol dehydrogenase A, B 351 Nicotiana tabacum EC#: 1.3.1.102 IUBMB
Gene Name(s): DBR

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

A, B NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CIY
Query on CIY

A (2E)-3-(4-hydroxy-3-methoxyphenyl)prop-2- enal
Coniferaldehyde (Synonym)
C10 H10 O3
DKZBBWMURDFHNE-NSCUHMNNSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.172
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 88.86 α = 90.00
b = 149.86 β = 115.96
c = 67.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-05
  • Released Date: 2013-01-30
  • Deposition author(s): Toogood, H.S., Scrutton, N.S.

Revision History

No revisions since initial release