4H35

Feruloyl Esterase Domain of XYNY from Clostridium thermocellum before exposure to 266nm UV laser

Structural Biology Knowledgebase: 4H35 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.177
  • R-Value Work: 0.157

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4H35

Classification: HYDROLASE

Total Structure Weight: 69433.15

Macromolecule Entities
Molecule Chains Length Organism Details
Endo-1,4-beta-xylanase Y A, B 297 Ruminiclostridium thermocellum EC#: 3.2.1.8 IUBMB
Fragment: feruloyl esterase domain (UNP residues 792-1077)
Mutation: D1017E, H1018D
Gene Name(s): xynY
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CD
Query on CD

A, B CADMIUM ION
Cd
WLZRMCYVCSSEQC-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET
SEP
Query on SEP
A, B L-PEPTIDE LINKING C3 H8 N O6 P SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.177
  • R-Value Work: 0.157
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.37 α = 90.00
b = 108.40 β = 90.00
c = 112.86 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-13
  • Released Date: 2012-12-12
  • Deposition author(s): Pereira, P.J.B., de Sanctis, D.

Revision History

  • 2013-02-20
    Type: Citation | Details: Citation update