4H1S

Crystal Structure of a Truncated Soluble form of Human CD73 with Ecto-5'-Nucleotidase activity

Structural Biology Knowledgebase: 4H1S SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.175

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4H1S

Classification: HYDROLASE

Total Structure Weight: 118983.57

Macromolecule Entities
Molecule Chains Length Organism Details
5'-nucleotidase A, B 530 Homo sapiens EC#: 3.1.3.5 IUBMB
Fragment: UNP residues 27-549
Gene Name(s): NT5E Gene View NT5 NTE

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.175
  • Space Group: P 2 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 54.91 α = 90.00
b = 95.01 β = 90.00
c = 230.29 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-11
  • Released Date: 2012-10-03
  • Deposition author(s): Heuts, D.P., Weissenborn, M.J., Olkhov, R.V., Shaw, A.M., Levy, C.W., Scrutton, N.S.

Revision History

  • 2012-11-14
    Type: Citation | Details: Citation update