4GJV

Streptavidin-S112H

Structural Biology Knowledgebase: 4GJV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GJV

Classification: Biotin-binding protein

Total Structure Weight: 17465.77

Macromolecule Entities
Molecule Chains Length Organism Details
Streptavidin A 159 Streptomyces avidinii Mutation: S112H
Gene Name(s):

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
0OD
Query on 0OD

A trichloro{(1,2,3,4,5-eta)-1,2,3,4-tetramethyl- 5-[2-({5-[(3aS,4S,6aR)-2-oxohexahydro-1H- thieno[3,4-d]imidazol-4-yl]pentanoyl}amino)ethyl]cyclopentadienyl}rhodium(1+)
[Cp*(Biot-methylene)RhCl(H2O)2]+ (Synonym)
C21 H32 Cl3 N3 O2 Rh S
ZUVIAMPSTWXRBZ-PCIMLXTCSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RH
Query on RH

A Rhodium
Rh
OBDSITLACDGNMC-UHFFFAOYAF
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.185
  • Space Group: I 41 2 2

Unit Cell:

Length (Å) Angle (°)
a = 57.58 α = 90.00
b = 57.58 β = 90.00
c = 183.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-10
  • Released Date: 2013-02-13
  • Deposition author(s): Heinisch, T., Schirmer, T.

Revision History

  • 2013-04-24
    Type: Citation | Details: Citation update
  • 2013-04-10
    Type: Citation | Details: Citation update