4GEQ

Crystal structure of the Spc24-Spc25/Cnn1 binding interface

Structural Biology Knowledgebase: 4GEQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.207

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GEQ

Classification: CELL CYCLE

Total Structure Weight: 41465.47

Macromolecule Entities
Molecule Chains Length Organism Details
Kinetochore protein SPC25 A, C 90 Saccharomyces cerevisiae Fragment: Spc25p C-terminal domain, residues 133-221
Gene Name(s): SPC25 Gene View YER018C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Kinetochore protein SPC24 B, D 66 Saccharomyces cerevisiae Fragment: Spc24p C-terminal domain, residues 155-213
Gene Name(s): SPC24 Gene View YMR117C YM9718.16C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Kinetochore-associated protein CNN1 E, F 25 Saccharomyces cerevisiae Fragment: Cnn1p N-terminal motif, residues 60-84
Gene Name(s): CNN1 Gene View YFR046C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

B, C GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.207
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 34.14 α = 90.00
b = 61.85 β = 90.00
c = 139.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-08-02
  • Released Date: 2013-01-30
  • Deposition author(s): Malvezzi, F., Litos, G., Schleiffer, A., Heuck, A., Clausen, T., Westermann, S.

Revision History

  • 2015-07-01
    Type: Data collection | Details: --
  • 2013-02-20
    Type: Citation | Details: Citation update