4G63

Crystal structure of cytosolic IMP-GMP specific 5'-nucleotidase (lpg0095) in complex with phosphate ions from Legionella pneumophila, Northeast Structural Genomics Consortium Target LgR1

Structural Biology Knowledgebase: 4G63 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.222

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4G63

Classification: DNA BINDING PROTEIN

Total Structure Weight: 54927.04

Macromolecule Entities
Molecule Chains Length Organism Details
Cytosolic IMP-GMP specific 5'-nucleotidase A 470 Legionella pneumophila Gene Name(s): lpg0095
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.258
  • R-Value Work: 0.222
  • Space Group: I 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 154.09 α = 90.00
b = 154.09 β = 90.00
c = 191.23 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-18
  • Released Date: 2012-10-10
  • Deposition author(s): Forouhar, F., Abashidze, M., Seetharaman, J., Ho, C.K., Ciccosanti, C., Mao, L., Xiao, R., Acton, T.B., Montelione, G.T., Tong, L., Northeast Structural Genomics Consortium (NESG)

Revision History

  • 2014-04-02
    Type: Citation | Details: Citation update
  • 2014-03-05
    Type: Citation | Details: Citation update
  • 2014-03-05
    Type: Biological assembly | Details: --