4DPB

The 1.00 Angstrom crystal structure of oxidized (CuII) poplar plastocyanin A at pH 8.0

Structural Biology Knowledgebase: 4DPB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.0 Å
  • R-Value Free: 0.136
  • R-Value Work: 0.117

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DPB

Classification: ELECTRON TRANSPORT

Total Structure Weight: 10557.24

Macromolecule Entities
Molecule Chains Length Organism Details
Plastocyanin A, chloroplastic X 99 Populus nigra Fragment: UNP residues 70-168
Gene Name(s): PETE
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CU
Query on CU

X COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.0 Å
  • R-Value Free: 0.136
  • R-Value Work: 0.117
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 29.19 α = 90.00
b = 46.40 β = 90.00
c = 56.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-02-13
  • Released Date: 2013-02-13
  • Deposition author(s): Kachalova, G.S., Shosheva, A.H., Bourenkov, G.P., Donchev, A.A., Dimitrov, M.I., Bartunik, H.D.

Revision History

No revisions since initial release